36CA
Dehydrogenase AprD5 complexed with NAD and UDP-beta-D-Glucose
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I24 |
| Synchrotron site | Diamond |
| Beamline | I24 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2024-09-14 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 0.61992 |
| Spacegroup name | P 1 |
| Unit cell lengths | 56.100, 60.330, 71.030 |
| Unit cell angles | 70.40, 72.30, 89.93 |
Refinement procedure
| Resolution | 35.460 - 1.870 |
| R-factor | 0.2164 |
| Rwork | 0.215 |
| R-free | 0.24540 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.932 |
| Data reduction software | xia2 |
| Data scaling software | Aimless |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.18rc3_3805: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 41.060 | 1.920 |
| High resolution limit [Å] | 1.870 | 1.870 |
| Number of reflections | 66891 | 4950 |
| <I/σ(I)> | 4.5 | |
| Completeness [%] | 97.5 | |
| Redundancy | 1.8 | |
| CC(1/2) | 0.958 | 0.298 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 0.1 M TRIS pH 8.5, 15% PEG 20000 |
