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32CR

SHANK3 PDZ (570-664) in complex with an internal PDZ binding motif (843-864) in Densin-180

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2026-06-25
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)0.62
Spacegroup nameP 21 21 21
Unit cell lengths63.890, 71.340, 114.920
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.639 - 1.980
Rwork0.201
R-free0.25660
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.728
Data reduction softwarexia2 (3dii)
Data scaling softwarexia2 (3dii)
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0430 (refmacat 0.4.105))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.6402.010
High resolution limit [Å]1.9801.980
Rmeas0.2011.804
Number of reflections373091820
<I/σ(I)>7.61.1
Completeness [%]100.099.8
Redundancy6.65.7
CC(1/2)1.0000.400
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5292.1560 mM magnesium chloride hexahydrate, 60 mM calcium chloride dihydrate, 100 mM Tris/Bicine pH 8.5, 12% v/v PEG 500 MME, 6% w/v PEG 20000

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PDB entries from 2026-07-29

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