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2ZZN

The complex structure of aTrm5 and tRNACys

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]100
Detector technologyCCD
Collection date2007-12-03
DetectorADSC QUANTUM 315
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths81.838, 106.537, 134.459
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.690 - 2.950
R-factor0.226
Rwork0.226
R-free0.29500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2zzm
RMSD bond length0.008
RMSD bond angle1.300
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareCNS (1.2)
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]2.950
Number of reflections25625
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1sitting drop, vapor diffusion7.529387.5mM Mg(HCOO)2, 4.38% PEG 3350, 43.8mM CH3COONa pH 4.6, 8.8% MPD, 0.4mM CYMAL-5, 12.5mM Na-HEPES pH 7.5, sitting drop, vapor diffusion, temperature 293K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111Mg(HCOO)2
1012CH3COONa
1112MPD
1212CYMAL-5
1312Na-HEPES
1412H2O
211PEG 3350
311CH3COONa
411MPD
511CYMAL-5
611Na-HEPES
711H2O
812Mg(HCOO)2
912PEG 3350

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PDB entries from 2024-08-07

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