2XYU
Crystal structure of EphA4 kinase domain in complex with VUF 12058
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-08-29 |
Detector | MARMOSAIC 225 mm CCD |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 32.544, 91.545, 97.959 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.187 - 2.117 |
R-factor | 0.1916 |
Rwork | 0.189 |
R-free | 0.22980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2y6m |
RMSD bond length | 0.009 |
RMSD bond angle | 1.024 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | AMoRE |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.190 | 2.230 |
High resolution limit [Å] | 2.120 | 2.120 |
Rmerge | 0.140 | 0.690 |
Number of reflections | 17378 | |
<I/σ(I)> | 8.5 | 1.9 |
Completeness [%] | 99.5 | 98.2 |
Redundancy | 3.6 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 5.5 | AMMONIUM SULFATE, BISTRIS PH 5.5, PEG 10K |