2XWM
Crystal structure of IspD from Mycobacterium smegmatis in complex with CMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-2 |
Synchrotron site | ESRF |
Beamline | ID14-2 |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2010-02-10 |
Detector | ADSC QUANTUM 4r |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 45.590, 71.700, 111.890 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 60.370 - 1.800 |
R-factor | 0.18185 |
Rwork | 0.180 |
R-free | 0.21529 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.254 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.6.0060) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.000 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.090 | 0.560 |
Number of reflections | 34794 | |
<I/σ(I)> | 16.2 | 3.5 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 7 | 7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | SITTING-DROP VAPOR-DIFFUSION METHOD AT 293 K. DROPS WITH 300 NANOLITERS PROTEIN SOLUTION (PROTEIN AT 40 MG/ML IN 20 MM BIS-TRIS-PROPANE, PH 6.5, 0.1 M NACL WITH 10 MM CMP, 10 MM MGCL2 AND 10 MM ERYTHRITOL) AND 300 NANOLITERS SCREENING/RESERVOIR SOLUTION (10% (W/V) PEG 20,000, 20% (V/V) MONOMETHYL ETHER PEG 550, 0.03M NAF, 0.03M NAI, 0.03M NABR, AND 0.1M MOPS/NA-HEPES, PH 7.5) |