2VXU
Crystal structure of murine reference antibody 125-2H Fab fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-03-20 |
Detector | MARRESEARCH |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 79.061, 92.490, 137.645 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 17.420 - 2.360 |
R-factor | 0.187 |
Rwork | 0.184 |
R-free | 0.24200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fns |
RMSD bond length | 0.014 |
RMSD bond angle | 1.501 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 17.500 | 2.390 |
High resolution limit [Å] | 2.330 | 2.330 |
Rmerge | 0.050 | 0.240 |
Number of reflections | 41229 | |
<I/σ(I)> | 18.9 | 4.9 |
Completeness [%] | 94.0 | 25.2 |
Redundancy | 5.2 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7.5 | 277 | FAB (13 MG/ML, 2 MICROLITERS [UL]) WAS MIXED WITH 2 UL OF RESERVOIR (10% POLYETHYLENEGLYCOL (PEG) 6000, 100 MM HEPES, PH 7.5, 5% 2, 4-METHYLPENTANEDIOL) AND SUSPENDED OVER THE RESERVOIR AT 277 K. ROD-LIKE CRYSTALS APPEARED WITHIN ONE DAY. |