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2VSC

Structure of the immunoglobulin-superfamily ectodomain of human CD47

Experimental procedure
実験手法SINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]100
Detector technologyCCD
Collection date2006-04-12
DetectorMARRESEARCH
Spacegroup nameC 1 2 1
格子定数 [Å]201.137, 47.502, 56.811
格子定数 [度]90.00, 99.31, 90.00
精密化法
残基28.190 - 1.900
R因子0.219
Rwork0.216
R-free0.26300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2jjs CHAIN C
結合長の平均二乗偏差(RMSD) [Å]0.010
結合角の平均二乗偏差(RMSD) [度]1.367
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0019)
Quality characteristics
 OverallOuter shell
分解能 [Å] (低)28.3002.000
分解能 [Å] (高)1.9001.900
Rmerge_l_obs0.0700.400
独立反射数41496
<I/σ(I)>13.92.9
完全性 [%]98.891.8
冗長性3.73.1
結晶化条件
結晶ID方法pH温度溶液条件
15.5200 NL 17 MG/ML CD47 PLUS 100 NL RESERVOIR (0.2 M MGCL2, 0.1 M BIS-TRIS PH 5.5, 25% W/V PEG 3350) EQUILIBRATED AGAINST 95 UL OF RESERVOIR AT 20.5 C.

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件を2024-09-18に公開中

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