2VBI
Holostructure of pyruvate decarboxylase from Acetobacter pasteurianus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX II BEAMLINE I911-2 |
Synchrotron site | MAX II |
Beamline | I911-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-10-19 |
Detector | MARRESEARCH |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 179.619, 162.434, 169.331 |
Unit cell angles | 90.00, 102.71, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.750 |
R-factor | 0.225 |
Rwork | 0.224 |
R-free | 0.24300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1zpd |
RMSD bond length | 0.007 |
RMSD bond angle | 1.095 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.440 | 2.900 |
High resolution limit [Å] | 2.750 | 2.750 |
Rmerge | 0.080 | 0.430 |
Number of reflections | 119238 | |
<I/σ(I)> | 10.8 | 2 |
Completeness [%] | 97.2 | 98.5 |
Redundancy | 2.4 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 |