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2QT1

Human nicotinamide riboside kinase 1 in complex with nicotinamide riboside

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyCCD
Collection date2007-02-23
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)0.97934
Spacegroup nameC 2 2 21
Unit cell lengths55.529, 141.906, 62.062
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.010 - 1.320
R-factor0.243
Rwork0.242
R-free0.26000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2p0e
RMSD bond length0.018
RMSD bond angle1.480
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC (refmac_5.2.0019)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.00040.0001.370
High resolution limit [Å]1.3202.8401.320
Rmerge0.1290.0840.599
Number of reflections54142
<I/σ(I)>5.4
Completeness [%]93.988.494.3
Redundancy6.96.75.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION629115% PEG 3350, 0.2M Sodium phosphate monobasic, 0.1M Bis-Tris. The protein solution (40mg/mL) contained 0.01M Nicotinamide riboside, 0.01M AMPPNP and 0.02M Magnesium chloride, pH 6.0, VAPOR DIFFUSION, temperature 291K

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