2QOG
Crotoxin B, the basic PLA2 from Crotalus durissus terrificus.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE D03B-MX1 |
Synchrotron site | LNLS |
Beamline | D03B-MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-03-14 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 1.427 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 72.895, 81.159, 100.039 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.930 - 2.280 |
R-factor | 0.228 |
Rwork | 0.228 |
R-free | 0.26000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | monomer A of BthTX-I (closed form) |
RMSD bond length | 0.010 |
RMSD bond angle | 1.900 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.360 |
High resolution limit [Å] | 2.280 | 2.280 |
Rmerge | 0.127 | 0.547 |
Number of reflections | 27552 | |
<I/σ(I)> | 9.57 | 2.04 |
Completeness [%] | 85.9 | 90 |
Redundancy | 4.2 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | 291 | 0.1 M Tris HCl and 11% (w/v) PEG 8000, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K |