Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2PYD

The crystal structure of Glycogen phosphorylase in complex with glucose at 100 K

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X13
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX13
Temperature [K]100
Detector technologyCCD
Collection date2005-11-03
DetectorMAR CCD 165 mm
Wavelength(s)0.8068
Spacegroup nameP 43 21 2
Unit cell lengths125.730, 125.730, 114.933
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 1.930
R-factor0.1926
Rwork0.190
R-free0.23500
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)1ww2
RMSD bond length0.007
RMSD bond angle1.103
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.960
High resolution limit [Å]1.9301.930
Number of reflections65895
<I/σ(I)>18.24.2
Completeness [%]99.699.8
Redundancy4.94.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1SMALL TUBES6.728910 MM BES BUFFER, 0.1 MM EDTA,0.02% NAN3, 3 MM DTT, pH 6.7, SMALL TUBES, temperature 289K

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon