2PI6
Crystal structure of the sheep signalling glycoprotein (SPS-40) complex with 2-methyl-2-4-pentanediol at 1.65A resolution reveals specific binding characteristics of SPS-40
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X13 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X13 |
Detector technology | IMAGE PLATE |
Collection date | 2007-03-10 |
Detector | MAR scanner 345 mm plate |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.873, 66.415, 105.692 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.900 - 1.650 |
R-factor | 0.16839 |
Rwork | 0.167 |
R-free | 0.21725 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2dpe |
RMSD bond length | 0.013 |
RMSD bond angle | 1.507 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | REFMAC (5.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 55.900 | 1.680 |
High resolution limit [Å] | 1.650 | 1.650 |
Number of reflections | 50988 | |
Completeness [%] | 99.9 | 99.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.8 | 298 | Tri-HCl, 20% Ethanol, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 298K |