2O72
Crystal Structure Analysis of human E-cadherin (1-213)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2003-08-03 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.0000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 137.341, 41.077, 59.542 |
Unit cell angles | 90.00, 111.15, 90.00 |
Refinement procedure
Resolution | 39.100 - 2.000 |
R-factor | 0.193 |
Rwork | 0.191 |
R-free | 0.23400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1edh |
RMSD bond length | 0.014 |
RMSD bond angle | 1.445 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.100 | 2.030 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.073 | 0.323 |
Number of reflections | 20837 | |
<I/σ(I)> | 9.3 | 2.5 |
Completeness [%] | 98.0 | 77.8 |
Redundancy | 6.8 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 10% PEG 8000, 0.2M calcium chloride, 5% DMSO, 0.1M Hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 4K, temperature 277K |