2G1P
Structure of E. coli DNA adenine methyltransferase (DAM)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-04-17 |
Detector | MARRESEARCH |
Wavelength(s) | 0.97179 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 46.200, 71.300, 97.800 |
Unit cell angles | 90.00, 90.03, 90.00 |
Refinement procedure
Resolution | 33.600 - 1.890 |
R-factor | 0.188 |
Rwork | 0.188 |
R-free | 0.21600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Modified PDB entry 2DPM |
RMSD bond length | 0.010 |
RMSD bond angle | 1.400 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | GLRF |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.600 | 1.920 |
High resolution limit [Å] | 1.890 | 1.890 |
Rmerge | 0.102 | 0.575 |
Number of reflections | 51126 | |
<I/σ(I)> | 9.1 | |
Completeness [%] | 99.9 | 98.7 |
Redundancy | 7.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 289 | 100 mM KCl, 10 mM MgSO4, 5-15% PEG400, 100 mM MES or HEPES (pH 6.6-7.4), pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 289K |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | KCl | ||
10 | 1 | 2 | H2O | ||
2 | 1 | 1 | MgSO4 | ||
3 | 1 | 1 | PEG400 | ||
4 | 1 | 1 | MES | ||
5 | 1 | 1 | HEPES | ||
6 | 1 | 1 | H2O | ||
7 | 1 | 2 | KCl | ||
8 | 1 | 2 | MgSO4 | ||
9 | 1 | 2 | PEG400 |