2FV7
Crystal structure of human ribokinase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-12-10 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.530, 72.978, 90.958 |
Unit cell angles | 90.00, 91.08, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.100 |
R-factor | 0.201 |
Rwork | 0.198 |
R-free | 0.24840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdb entries 1RKS 1vm7 |
RMSD bond length | 0.017 |
RMSD bond angle | 1.462 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (refmac_5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.180 |
High resolution limit [Å] | 2.100 | 4.520 | 2.100 |
Rmerge | 0.046 | 0.024 | 0.261 |
Number of reflections | 34881 | 3509 | 3403 |
<I/σ(I)> | 13.6 | ||
Completeness [%] | 99.3 | ||
Redundancy | 3 | 2.9 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 40% PEG-550MME, vapor diffusion, sitting drop, temperature 291K |