Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2F6X

Crystal Structure of (S)-3-O-Geranylgeranylglyceryl Phosphate Synthase complexed with sn-G1P and MPD

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-D
Synchrotron siteAPS
Beamline14-BM-D
Temperature [K]100
Detector technologyCCD
Collection date2004-10-31
DetectorADSC QUANTUM 4
Wavelength(s)1.000
Spacegroup nameH 3
Unit cell lengths95.880, 95.880, 166.300
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.000 - 2.000
Rwork0.188
R-free0.22740
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Determined from a SeMet MAD experiment
RMSD bond length0.009
RMSD bond angle1.390
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.0420.258
Number of reflections37366
Completeness [%]99.9100
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6298PEG 4000, magnesium chloride, sodium citrate, sn-glycerol-1-phosphate (added during cryoprotection), 2-methyl-2,4-pentanediol (added during cryoprotection), pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon