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2E90

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium, pyrophosphate and FPP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-5A
Synchrotron sitePhoton Factory
BeamlineBL-5A
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths45.773, 115.938, 126.745
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.140 - 2.550
Rwork0.185
R-free0.23900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2dh4
RMSD bond length0.011
RMSD bond angle1.400
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.640
High resolution limit [Å]2.5502.550
Rmerge0.0630.225
Number of reflections21952
<I/σ(I)>20.33.4
Completeness [%]97.382.8
Redundancy5.23.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52980.08M CH3COONa, 16% PEG 4000, 6-10% glycerol, 6-10% 1,2-propanediol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K

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PDB entries from 2024-10-30

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