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2BU8

crystal structures of human pyruvate dehydrogenase kinase 2 containing physiological and synthetic ligands

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSRS BEAMLINE PX9.6
Synchrotron siteSRS
BeamlinePX9.6
Temperature [K]100
Detector technologyCCD
DetectorADSC CCD
Spacegroup nameP 64
Unit cell lengths110.699, 110.699, 84.609
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution30.000 - 2.500
Rwork0.233
R-free0.24050
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2btz
RMSD bond length0.010
RMSD bond angle1.295
Data reduction softwareHKL
Data scaling softwareSCALEPACK
Phasing softwareCNX
Refinement softwareCNX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.590
High resolution limit [Å]2.5002.500
Rmerge0.0400.230
Number of reflections21614
Completeness [%]99.298.9
Redundancy3.53.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6277100MM MES PH5.8-6,10% ISOPROPANOL,200MM CALCIUM ACETATE,10MG/ML PROTEIN,4 DEGREES, pH 6.00

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PDB entries from 2024-08-28

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