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2BU7

crystal structures of human pyruvate dehydrogenase kinase 2 containing physiological and synthetic ligands

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU IMAGE PLATE
Spacegroup nameP 64
Unit cell lengths108.876, 108.876, 84.025
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution30.000 - 2.400
Rwork0.211
R-free0.24120
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2btz
RMSD bond length0.009
RMSD bond angle1.356
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNX
Refinement softwareCNX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.490
High resolution limit [Å]2.4002.400
Rmerge0.0600.300
Number of reflections21046
<I/σ(I)>233.66
Completeness [%]94.365.6
Redundancy7.27
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
15.8277100MM MES PH5.8-6, 10% ISOPROPANOL, 200MM CALCIUM ACETATE, 10MG/ML PROTEIN, 4 DEGREES, pH 5.80

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PDB entries from 2024-11-06

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