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2YK4

Structure of Neisseria LOS-specific sialyltransferase (NST).

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.2
Synchrotron siteALS
Beamline8.2.2
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315r
Spacegroup nameP 21 21 2
Unit cell lengths86.565, 124.735, 41.866
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution71.070 - 1.940
R-factor0.19639
Rwork0.195
R-free0.22274
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2yk5
RMSD bond length0.017
RMSD bond angle1.619
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.5.0110)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]71.0701.970
High resolution limit [Å]1.9401.940
Rmerge0.0100.050
Number of reflections34365
<I/σ(I)>35.53.22
Completeness [%]100.099.9
Redundancy8.88.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION4.4PROTEIN WAS CRYSTALLIZED BY VAPOR DIFFUSION METHODS USING DROPS OF PROTEIN MIXED WITH AN EQUAL VOLUME OF PRECIPITANT: 100 MM SODIUM ACETATE (PH 4.2 - 4.4) 1.7 M DI-AMMONIUM SULFATE.

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PDB entries from 2024-05-15

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