2XJD
Crystal structure of the D52N variant of cytosolic 5'-nucleotidase II in complex with inorganic phosphate and deoxyadenosine triphosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-11-02 |
Detector | ADSC CCD |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 92.299, 128.432, 131.201 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 64.280 - 2.000 |
R-factor | 0.17757 |
Rwork | 0.176 |
R-free | 0.20821 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2jcm |
RMSD bond length | 0.015 |
RMSD bond angle | 1.335 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 65.650 | 2.110 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.140 | 0.540 |
Number of reflections | 52910 | |
<I/σ(I)> | 10.6 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 5 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 0.1 M BICINE PH 9, 10% PEG6000 |