2X0N
Structure of glycosomal glyceraldehyde-3-phosphate dehydrogenase from Trypanosoma brucei determined from Laue data
Replaces: 1GGAExperimental procedure
Experimental method | LAUE |
Source type | SYNCHROTRON |
Source details | SRS BEAMLINE PX9.7 |
Synchrotron site | SRS |
Beamline | PX9.7 |
Temperature [K] | 273 |
Detector technology | FILM |
Detector | CEA |
Wavelength(s) | 0.489-1.905 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 135.520, 256.270, 114.910 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 7.399 - 3.200 |
R-factor | 0.1533 |
Rwork | 0.150 |
R-free | 0.21820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1gd1 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.492 |
Data reduction software | DARESBURY (LAUE PROCESSING SOFTWARE) |
Data scaling software | DARESBURY (LAUE PROCESSING SOFTWARE) |
Phasing software | MERLOT |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 7.400 |
High resolution limit [Å] | 3.200 |
Rmerge | 0.150 |
Number of reflections | 34991 |
<I/σ(I)> | 7.2 |
Completeness [%] | 57.0 |
Redundancy | 2.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 6.5 | PROTEIN: 5 MICROL OF 6 MG/ML GGAPDH IN 25 MM TRIS HCL PH 7.8, 0.6M AMMONIUM SULPHATE, 2MM NAD, 1MM DITHIOTHREITOL 1MM NA AZIDE, 1 MM EDTA. PRECIPITANT: 5 MICROL OF 52% SATURATED AMMONIUM SULPHATE, 0.2M N,N-BIS-(2-HYDROXYETHYL)-2-AMINOETHANE SULFONIC ACID PH 6.5, 1MM DITHIOTHREITOL, 1MM NA AZIDE, 1MM EDTA, 20MM 3-PHOSPHOGLYCERATE. RESERVOIR: 1 ML |