2VTF
X-ray crystal structure of the Endo-beta-N-acetylglucosaminidase from Arthrobacter protophormiae E173Q mutant reveals a TIM barrel catalytic domain and two ancillary domains
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-11-09 |
Detector | ADSC CCD |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 89.840, 226.760, 68.350 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.030 - 1.790 |
R-factor | 0.166 |
Rwork | 0.164 |
R-free | 0.20200 |
Structure solution method | MAD |
Starting model (for MR) | NONE |
RMSD bond length | 0.010 |
RMSD bond angle | 1.248 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | autoSHARP |
Refinement software | REFMAC (5.4.0077) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 80.000 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.090 | 0.340 |
Number of reflections | 130527 | |
<I/σ(I)> | 23 | 2.7 |
Completeness [%] | 99.9 | 99.7 |
Redundancy | 5.7 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 6.5 | 0.35 M KSCN, 0.1 M BIS-TRIS PROPANE (PH 6.5), 15% PEG 3350 |