2V4Q
Post-insertion complex of the Y-family DNA polymerase Dpo4 with M1dG containing template DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2008-04-12 |
Detector | MARRESEARCH |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 92.610, 103.140, 52.010 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.720 - 2.600 |
R-factor | 0.205 |
Rwork | 0.205 |
R-free | 0.25400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2bqr |
RMSD bond length | 0.008 |
RMSD bond angle | 1.200 |
Data reduction software | XDS |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | CNS (1.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.690 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.050 | 0.460 |
Number of reflections | 15832 | |
<I/σ(I)> | 23 | 4.4 |
Completeness [%] | 99.0 | 96.8 |
Redundancy | 5.5 | 5.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7.4 | 7.5% POLYETHYLENE GLYCOL 3350, 100 MM CALCIUM ACETATE, 25 MM TRIS HCL (PH 7.4), 100 MM SODIUM CHLORIDE, 2.5% GLYCEROL, 1 MM DGTP, 5 MM CALCIUM CHLORIDE. |