2QNC
Crystal structure of T4 Endonuclease VII N62D mutant in complex with a DNA Holliday junction
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-06-14 |
Detector | ADSC QUANTUM 4 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 99.197, 99.197, 186.884 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.270 - 3.100 |
R-factor | 0.258 |
Rwork | 0.258 |
R-free | 0.27800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | T4 ENDONUCLEASE VII-HETERODUPLEX COMPLEX |
RMSD bond length | 0.009 |
RMSD bond angle | 1.200 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | CNS (1.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.270 | 3.220 |
High resolution limit [Å] | 3.100 | 3.100 |
Number of reflections | 17475 | |
<I/σ(I)> | 26.8 | 3.73 |
Completeness [%] | 98.9 | 95.7 |
Redundancy | 7.9 | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 5.5 | 293 | 25 %(w/v) PEG 3350, 0.1 M Bis-Tris, pH 5.5, VAPOR DIFFUSION, temperature 293K, pH 5.50 |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | PEG 3350 | ||
2 | 1 | 1 | Bis-Tris | ||
3 | 1 | 2 | PEG 3350 | ||
4 | 1 | 2 | Bis-Tris |