Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2Q5K

Crystal structure of lopinavir bound to wild type HIV-1 protease

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]200
Detector technologyIMAGE PLATE
Collection date2005-03-18
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths51.343, 58.043, 61.133
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.110 - 1.950
R-factor0.19421
Rwork0.192
R-free0.23600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1f7a
RMSD bond length0.008
RMSD bond angle1.195
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]1.950
Rmerge0.044
Number of reflections13461
<I/σ(I)>19.6
Completeness [%]97.0
Redundancy3.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.2298126mM sodium phosphate, 63mM sodium citrate, 24-29% ammonium sulphate, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon