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2PXJ

The complex structure of JMJD2A and monomethylated H3K36 peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Wavelength(s)1.0
Spacegroup nameP 21 21 2
Unit cell lengths100.863, 150.172, 57.317
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.560 - 2.000
Rwork0.256
R-free0.27620
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)2gp3
RMSD bond length0.009
RMSD bond angle1.400
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.0340.535
Number of reflections58067
<I/σ(I)>18.11.2
Completeness [%]97.378.5
Redundancy8.85.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.515-17% PEG 5000 mme, pH 8.5, VAPOR DIFFUSION, HANGING DROP

220113

PDB entries from 2024-05-22

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