Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2P5T

Molecular and structural characterization of the PezAT chromosomal toxin-antitoxin system of the human pathogen Streptococcus pneumoniae

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]90
Detector technologyCCD
Collection date2006-08-17
DetectorMARMOSAIC 225 mm CCD
Spacegroup nameP 21 21 21
Unit cell lengths80.520, 102.860, 254.440
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.670 - 3.200
R-factor0.21692
Rwork0.214
R-free0.27732
Structure solution methodSAD
RMSD bond length0.008
RMSD bond angle1.059
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareSHELXD
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.6703.300
High resolution limit [Å]3.2003.200
Rmerge0.0600.387
Number of reflections34352
<I/σ(I)>20.83.1
Completeness [%]95.385.5
Redundancy5.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP629312.5-15% (v/v) iso-propanol, 100 mM MES-NaOH, 6% (v/v) dioxane (30% (v/v)), pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon