2IVE
Structure of protoporphyrinogen oxidase from Myxococcus xanthus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SRS BEAMLINE PX14.2 |
Synchrotron site | SRS |
Beamline | PX14.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | ADSC CCD |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 148.566, 148.566, 132.745 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 74.330 - 2.700 |
R-factor | 0.248 |
Rwork | 0.247 |
R-free | 0.28700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1sez |
RMSD bond length | 0.006 |
RMSD bond angle | 1.122 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 74.300 | 2.850 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.140 | 0.570 |
Number of reflections | 41382 | |
<I/σ(I)> | 14.7 | 2.6 |
Completeness [%] | 100.0 | 99.8 |
Redundancy | 7.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7.5 | 0.1M TRIS/HCL PH 7.5, 1.5M AMMONIUM SULPHATE, 20% GLYCEROL, 1% PEG 4000 |