1ZS8
Crystal Structure of the Murine MHC Class Ib Molecule M10.5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 12.3.1 |
Synchrotron site | ALS |
Beamline | 12.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-04-03 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.11587 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 124.110, 134.710, 149.370 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 56.360 - 3.000 |
R-factor | 0.307 |
Rwork | 0.307 |
R-free | 0.30800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1K8D (confirmed with 3FRU) |
RMSD bond length | 0.009 |
RMSD bond angle | 1.600 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 99.000 | 3.110 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.156 | 0.535 |
Number of reflections | 46977 | |
<I/σ(I)> | 9 | 2.7 |
Completeness [%] | 91.2 | 64.8 |
Redundancy | 5.7 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 0.1 M imidazole, 20% PEG 1000, 0.2 M calcium acetate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 0.1 M imidazole, 20% PEG 1000, 0.2 M calcium acetate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K |