1YZQ
GppNHp-Bound Rab6 GTPase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RUH3R |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2003-05-13 |
Detector | MAR scanner 300 mm plate |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.495, 68.672, 73.102 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 6.000 - 1.780 |
R-factor | 0.23237 |
Rwork | 0.231 |
R-free | 0.26488 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Polyalanine Rab3a GTPase |
RMSD bond length | 0.008 |
RMSD bond angle | 1.177 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.830 |
High resolution limit [Å] | 1.780 | 1.780 |
Number of reflections | 20059 | |
<I/σ(I)> | 27.7 | 6.2 |
Completeness [%] | 99.4 | 95.1 |
Redundancy | 6 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 278 | 20% PEG 6000, 300mM Magnesium Chloride, 10% glycerol, 50mM HEPES, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 278K |