Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1Y2B

Catalytic Domain Of Human Phosphodiesterase 4D In Complex With 3,5-dimethyl-1H-pyrazole-4-carboxylic acid ethyl ester

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]93
Detector technologyCCD
DetectorADSC QUANTUM 210
Wavelength(s)1.1
Spacegroup nameP 21 21 21
Unit cell lengths60.469, 79.009, 164.141
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution81.650 - 1.400
R-factor0.17572
Rwork0.175
R-free0.18522
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle1.065
Data scaling softwareELVES
Phasing softwareEPMR
Refinement softwareREFMAC (5.1.25)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]81.6501.436
High resolution limit [Å]1.4001.400
Rmerge0.0480.588
Number of reflections144200
<I/σ(I)>9.42.6
Completeness [%]97.998
Redundancy6.84.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7288PEG3350, ethylene glycol, isopropanol, glycerol and DTT, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 288K

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon