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1XLM

D254E, D256E MUTANT OF D-XYLOSE ISOMERASE COMPLEXED WITH AL3 AND XYLITOL

Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU RUH2R
Temperature [K]293
Detector technologyIMAGE PLATE
Collection date1996-03
DetectorRIGAKU
Spacegroup nameC 2 2 2
Unit cell lengths139.600, 140.700, 83.600
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution8.000 - 2.400
R-factor0.1792
Rwork0.179
R-free0.22230

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Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1xla
RMSD bond length0.014
RMSD bond angle21.300

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Data reduction softwarebioteX
Data scaling softwarebioteX
Phasing softwareX-PLOR (3.851)
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]8.0002.480
High resolution limit [Å]2.4002.400
Rmerge0.119

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0.520
Total number of observations142427

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Number of reflections32570
<I/σ(I)>4.871.1
Completeness [%]97.098
Redundancy4.42.65
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

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7PROTEIN WAS CRYSTALLIZED FROM 0.75 M (NH4)2SO4, 1.50 MM THYMOL, 0.05 TRIS, PH 7.0, THEN SOAKED INTO A SOLUTION CONTAINING 5 MM AL3+, 1.5 M XYLITOL, 1.50 M (NH4)2SO4 AND 6.0 M THYMOL IN 1.50 M TRIS-HCL PH 8.0 FOR TWO DAYS
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10.0 (mg/ml)
21dropTris0.05 (M)
31dropammonium sulfate0.75 (M)
41dropthymol1.50 (mM)

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PDB entries from 2024-07-31

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