1XG3
Crystal structure of the C123S 2-methylisocitrate lyase mutant from Escherichia coli in complex with the reaction product, Mg(II)-pyruvate and succinate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU300 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2004-01-18 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 159.358, 85.993, 99.597 |
Unit cell angles | 90.00, 108.28, 90.00 |
Refinement procedure
Resolution | 25.850 - 1.900 |
Rwork | 0.161 |
R-free | 0.19500 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | structure of the C123S mutant enzyme in complex with isocitrate |
RMSD bond length | 0.007 |
RMSD bond angle | 1.300 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.850 | 1.970 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.025 | 0.084 |
Number of reflections | 89039 | |
<I/σ(I)> | 20.3 | |
Completeness [%] | 88.5 | 67.5 |
Redundancy | 2.82 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 30% PEG3350, 0.1M (NH)2SO4, 0.1M MES (pH6.0). 5mM Mg(II), 5mM isocitrate, followed by overnight soaking of a crystal in 35% PEG3350, 100 mM succinate, 100 mM pyruvate, 5mM Mg(II), VAPOR DIFFUSION, HANGING DROP, temperature 298.0K |