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1WNB

Escherichia coli YdcW gene product is a medium-chain aldehyde dehydrogenase (complexed with nadh and betaine aldehyde)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-2
Synchrotron siteESRF
BeamlineID14-2
Wavelength(s)0.933
Spacegroup nameP 1 21 1
Unit cell lengths80.278, 168.895, 85.476
Unit cell angles90.00, 90.65, 90.00
Refinement procedure
Resolution18.000 - 2.200
R-factor0.18663
Rwork0.182
R-free0.23853
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.022
RMSD bond angle1.906
Data reduction softwareDENZO
Data scaling softwareCCP4 ((SCALA))
Phasing softwareAMoRE
Refinement softwareREFMAC (5.1.19)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.320
High resolution limit [Å]2.2002.200
Rmerge0.089
Number of reflections107590
Completeness [%]93.793.7
Redundancy2.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6298pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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PDB entries from 2025-07-30

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