1WCD
Crystal structure of IBDV T1 virus-like particle reveals a missing link in icosahedral viruses evolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-02-23 |
Detector | ADSC CCD |
Spacegroup name | P 63 |
Unit cell lengths | 258.929, 258.929, 347.186 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.000 - 3.000 |
R-factor | 0.219 |
Rwork | 0.219 |
R-free | 0.24900 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.540 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 3.050 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.120 | 0.430 |
Number of reflections | 255310 | |
<I/σ(I)> | 11 | 2.6 |
Completeness [%] | 97.2 | 91 |
Redundancy | 5.4 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 5 | 100MM SODIUM ACETATE PH 5.0, 30% PEG 400, NACL 100MM |