1VP5
Crystal structure of 2,5-diketo-D-gluconic acid reductase (TM1009) from Thermotoga maritima at 2.40 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-04-03 |
Detector | ADSC |
Spacegroup name | P 65 |
Unit cell lengths | 94.314, 94.314, 146.855 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 24.930 - 2.400 |
R-factor | 0.15363 |
Rwork | 0.151 |
R-free | 0.20258 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | REFINEMENT STARTING MODEL |
RMSD bond length | 0.017 |
RMSD bond angle | 1.672 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (4.2)) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0001) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 24.930 | 2.460 |
High resolution limit [Å] | 2.400 | 2.400 |
Number of reflections | 28944 | |
<I/σ(I)> | 15.6 | 2.4 |
Completeness [%] | 99.9 | 100 |
Redundancy | 7.4 | 7.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 5.6 | 277 | 5.0% Glycerol, 19.0% iso-Propanol, 19.0% PEG-4000, 0.1M Citrate pH 5.6, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K |