1UX6
Structure of a thrombospondin C-terminal fragment reveals a novel calcium core in the type 3 repeats
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SRS BEAMLINE PX9.6 |
Synchrotron site | SRS |
Beamline | PX9.6 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-09-15 |
Detector | ADSC CCD |
Spacegroup name | H 3 2 |
Unit cell lengths | 162.340, 162.340, 85.140 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 20.000 - 1.900 |
R-factor | 0.199 |
Rwork | 0.199 |
R-free | 0.22700 |
Structure solution method | MIRAS |
RMSD bond length | 0.005 |
RMSD bond angle | 1.400 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MLPHARE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.000 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.086 | 0.370 |
Number of reflections | 32099 | |
Completeness [%] | 95.3 | 92.9 |
Redundancy | 5.4 | 4.0 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 7.5 | pH 7.50 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 6-10 (mg/ml) | |
2 | 1 | reservoir | MPD | 60 (%) | |
3 | 1 | reservoir | HEPES | 100 (mM) | pH7.5 |
4 | 1 | reservoir | 5 (mM) |