1UOO
Prolyl oligopeptidase from porcine brain, S554A mutant with bound peptide ligand GLY-PHE-ARG-PRO
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE BW7B |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | BW7B |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2003-02-11 |
Detector | MARRESEARCH |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 70.200, 98.700, 109.400 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.000 - 2.350 |
R-factor | 0.195 |
Rwork | 0.193 |
R-free | 0.23700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1h2z |
RMSD bond length | 0.006 * |
RMSD bond angle | 0.900 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CCP4 |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.000 | 2.430 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.099 | 0.467 |
Total number of observations | 117435 * | |
Number of reflections | 31460 | |
<I/σ(I)> | 12.6 | 2.2 |
Completeness [%] | 97.6 * | 98.7 |
Redundancy | 3.9 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 8.5 | 4 * | Fulop, V., (1998) Cell(Cambridge,Mass.), 94, 161. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | mPEG5000 | 17 (%(w/v)) | |
2 | 1 | reservoir | glycerol | 15 (%(v/v)) | |
3 | 1 | reservoir | monothioglycerol | 1 (%(v/v)) | |
4 | 1 | reservoir | 20 (mM) | ||
5 | 1 | reservoir | Tris | 100 (mM) | |
6 | 1 | drop | protein | 10 (mg/ml) |