Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1RZJ

HIV-1 HXBC2 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH CD4 AND INDUCED NEUTRALIZING ANTIBODY 17B

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X4A
Synchrotron siteNSLS
BeamlineX4A
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1996-05-25
DetectorFUJI
Wavelength(s)0.97953
Spacegroup nameP 2 2 21
Unit cell lengths71.250, 88.110, 196.540
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.810 - 2.200
R-factor0.2621
Rwork0.262
R-free0.32300
Structure solution methodTHIS DEPOSIT IS the re-refinement of previously determined 1G9M structure
RMSD bond length0.007
RMSD bond angle26.100

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.280
High resolution limit [Å]2.2002.200
Completeness [%]66.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7

*

2930.5 UL OF PROTEIN (~10MG/ML IN 350 MM NACL, 5 MM TRISCL PH 7.0) + 0.4 UL OF 0.1 M NACITRATE, 0.02 M NAHEPES, 10% ISOPROPANOL, 10.5% MONOMETHYL-PEG 5000, 0.0075% SEAPREP AGAROSE, PH 6.4 OVER A RESERVOIR OF 0.35 M NACL, 0.1 M NACITRATE, 0.02 M NAHEPES, 10% ISOPROPANOL, 10.5% MONOMETHYL-PEG 5000, PH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropTris-HCl2.5 (mM)
21drop0.35 (M)
31drop0.02 (%(v/v))pH7.0
41dropprotein4-8 (mg/ml)

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon