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1RM8

Crystal structure of the catalytic domain of MMP-16/MT3-MMP: Characterization of MT-MMP specific features

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU300
Temperature [K]293
Detector technologyIMAGE PLATE
Collection date1999-04-07
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameP 43 2 2
Unit cell lengths51.210, 51.210, 149.368
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution16.600 - 1.800
R-factor0.20907
Rwork0.208
R-free0.23600

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Pdb code 1bqq
RMSD bond length0.014

*

RMSD bond angle1.712
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]16.6001.900
High resolution limit [Å]1.8001.800
Rmerge0.083

*

0.327
Total number of observations119029

*

Number of reflections18455
<I/σ(I)>5.52.2
Completeness [%]96.791.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5293Tris-HCl, Sodium/potassium tartrate, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
1VAPOR DIFFUSION, SITTING DROP8.5293Tris-HCl, Sodium/potassium tartrate, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropTris-HCl50 (mM)pH8.5
21drop100 (mM)
31drop5 (mM)
41dropcdMT3-MMP10 (mg/ml)
51dropbatimastat0.5 (mg/ml)
61reservoirTris-HCl100 (mM)pH8.7
71reservoirsodium phosphate-tartrate1.1 (M)

225946

PDB entries from 2024-10-09

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