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1RK8

Structure of the cytosolic protein PYM bound to the Mago-Y14 core of the exon junction complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 4
Wavelength(s)1.00910
Spacegroup nameP 43 21 2
Unit cell lengths106.357, 106.357, 58.139
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 1.900
R-factor0.235
Rwork0.235
R-free0.24900
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle1.190
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareAMoRE
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.000
High resolution limit [Å]1.9001.900
Number of reflections26797
Completeness [%]99.899.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.5291.15HEPES, PEG 400, CaCl2, pH 7.5, VAPOR DIFFUSION, temperature 291.15K

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PDB entries from 2025-07-09

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