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1QR6

HUMAN MITOCHONDRIAL NAD(P)-DEPENDENT MALIC ENZYME

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F2
Synchrotron siteCHESS
BeamlineF2
Temperature [K]100
Detector technologyCCD
Collection date1998-10-05
DetectorADSC QUANTUM 4
Spacegroup nameB 1 1 2
Unit cell lengths204.400, 107.000, 59.200
Unit cell angles90.00, 90.00, 101.90
Refinement procedure
Resolution20.000 - 2.100
R-factor0.228
Rwork0.228
R-free0.28700
RMSD bond length0.008
RMSD bond angle1.400
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMADSYS
Refinement softwareX-PLOR (3.843)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.140
High resolution limit [Å]2.1002.100
Rmerge0.0430.108
Total number of observations343811

*

Number of reflections70337
<I/σ(I)>20
Completeness [%]90.069
Redundancy4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.4

*

4

*

100 MM HEPES, 8% PEG 8000, 5% MPD, 6 MM MGSO4, 10 MM TARTRONATE, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
1VAPOR DIFFUSION, HANGING DROP7.4

*

4

*

100 MM HEPES, 8% PEG 8000, 5% MPD, 6 MM MGSO4, 10 MM TARTRONATE, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
1VAPOR DIFFUSION, HANGING DROP7.4

*

4

*

100 MM HEPES, 8% PEG 8000, 5% MPD, 6 MM MGSO4, 10 MM TARTRONATE, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein8 (mg/ml)
101reservoirtartronate10 (mM)
21dropTris30 (mM)
31drop125 (mM)
41dropNAD+3 (mM)
51dropdithiothreitol10 (mM)
61reservoirHEPES100 (mM)
71reservoirPEG80008 (%)
81reservoirMPD5 (%)
91reservoir6 (mM)

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PDB entries from 2024-08-07

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