1PXW
Crystal structure of L7Ae sRNP core protein from Pyrococcus abyssii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-06-20 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 67.190, 112.550, 34.510 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 15.000 - 1.940 |
R-factor | 0.229 |
Rwork | 0.227 |
R-free | 0.27800 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.233 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | AMoRE |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 * | 2.030 |
High resolution limit [Å] | 2.900 * | 2.900 * |
Rmerge | 0.084 * | 0.231 * |
Total number of observations | 18984 * | |
Number of reflections | 5958 * | |
Completeness [%] | 91.0 * | 77.5 * |
Redundancy | 3.2 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 * | 293 | PEG MME 2000, magnesium chloride, sodium acetate, pH 4.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | drop | 300 (mM) | ||
3 | 1 | drop | Tris-HCl | 20 (mM) | pH8.0 |
4 | 1 | reservoir | PEG2000 MME | 20 (%(v/v)) | |
5 | 1 | reservoir | 160 (mM) | ||
6 | 1 | reservoir | sodium acetate | 100 (mM) | pH4.0 |