1PFG
Strategy to design inhibitors: Structure of a complex of Proteinase K with a designed octapeptide inhibitor N-Ac-Pro-Ala-Pro-Phe-DAla-Ala-Ala-Ala-NH2 at 2.5A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Source details | CONVENTIONAL Cu |
Temperature [K] | 277 |
Detector technology | IMAGE PLATE |
Collection date | 1995-10-03 |
Detector | MARRESEARCH |
Wavelength(s) | 1.5418 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 68.000, 68.000, 107.700 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 8.000 - 2.500 |
Rwork | 0.167 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1pek |
RMSD bond length | 0.018 |
RMSD bond angle | 2.600 |
Data reduction software | MOSFLM |
Data scaling software | CCP4 ((TRUNCATE)) |
Phasing software | AMoRE |
Refinement software | PROLSQ |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 20.000 |
High resolution limit [Å] | 2.500 |
Rmerge | 0.069 * |
Total number of observations | 49646 * |
Number of reflections | 7647 |
Completeness [%] | 83.0 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 16 * | 50mM Tris, 1mM CaCl2, 1M NaHNO3, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (%(w/v)) | |
2 | 1 | drop | Tris-HCl | 50 (mM) | |
3 | 1 | drop | 1 (mM) | pH6.5 | |
4 | 1 | reservoir | 1 (M) |