1P9P
The Crystal Structure of a M1G37 tRNA Methyltransferase, TrmD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 150 |
Detector technology | CCD |
Collection date | 2002-06-15 |
Wavelength(s) | 1.000 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 97.255, 97.255, 62.661 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 - 2.500 |
Rwork | 0.196 |
R-free | 0.24700 |
Structure solution method | MAD |
RMSD bond length | 0.035 |
RMSD bond angle | 2.800 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | CNX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.373 | |
Number of reflections | 12013 | |
<I/σ(I)> | 3.3 | |
Completeness [%] | 98.9 | 0.966 |
Redundancy | 8.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 283 | MPD, acetate buffer at pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 283K |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 283 | MPD, acetate buffer at pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 283K |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 283 | MPD, acetate buffer at pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 283K |