Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1P7T

Structure of Escherichia coli malate synthase G:pyruvate:acetyl-Coenzyme A abortive ternary complex at 1.95 angstrom resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL7-1
Synchrotron siteSSRL
BeamlineBL7-1
Temperature [K]100
Detector technologyCCD
Collection date2000-11-25
DetectorMARRESEARCH
Wavelength(s)1.008
Spacegroup nameP 21 21 21
Unit cell lengths73.931, 107.394, 204.974
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.220 - 1.950
R-factor0.197
Rwork0.194
R-free0.29400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1d8c
RMSD bond length0.022

*

RMSD bond angle2.700

*

Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareEPMR
Refinement softwareTNT
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.2202.060
High resolution limit [Å]1.9501.950
Rmerge0.051

*

0.212

*

Total number of observations591192

*

Number of reflections108075

*

Completeness [%]90.390.3
Redundancy3.3

*

3.3

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

7.9298MgCl2, Tris, DTT, pyruvate, acetyl-Coenzyme A, HEPES, PEG-8000, sodium acetate, pH 7.9, VAPOR DIFFUSION, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein27.7 (mg/ml)
101reservoirPEG800016 (%)
21drop8.3 (mM)
31dropTris8.3 (mM)pH7.9
41dropdithiothreitol4.2 (mM)
51droppyruvate50 (mM)
61dropacetyl-CoA4.2 (mM)
71reservoirHEPES50 (mM)pH7.0
81reservoirsodium acetate150 (mM)
91reservoir5 (mM)

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon