1P7C
Crystal Structure of HSV1-TK complexed with TP5A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 14-BM-C |
Synchrotron site | APS |
Beamline | 14-BM-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.0 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 113.219, 117.847, 108.400 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.900 * - 2.100 |
R-factor | 0.2436 |
Rwork | 0.239 |
R-free | 0.28500 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vtk |
RMSD bond length | 0.011 |
RMSD bond angle | 1.429 |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
High resolution limit [Å] | 2.100 | |
Rmerge | 0.072 * | 0.319 * |
Number of reflections | 41672 | |
Completeness [%] | 97.9 * | 97.9 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 * | Ammonium sulfate, Tris, TP5A, pH 6.75, VAPOR DIFFUSION, HANGING DROP |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | MES | 0.1 (M) | pH6.5 |
10 | 1 | drop | 100 (mM) | ||
11 | 1 | drop | glycerol | 5 (%) | |
2 | 1 | reservoir | ammonium sulfate | 1.2 (M) | |
3 | 1 | reservoir | dioxane | 5 (%) | |
4 | 1 | drop | enzyme | 5.5 (mg/ml) | |
5 | 1 | drop | TMP | 1.0 (mM) | |
6 | 1 | drop | ADP | 2.0 (mM) | |
7 | 1 | drop | HEPES | 25 (mM) | pH7.0 |
8 | 1 | drop | 5 (mM) | ||
9 | 1 | drop | dithiothreitol | 5 (mM) |