Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1OIP

The Molecular Basis of Vitamin E Retention: Structure of Human Alpha-Tocopherol Transfer Protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyCCD
Collection date2002-09-15
DetectorMARRESEARCH
Spacegroup nameP 41 21 2
Unit cell lengths77.810, 77.810, 128.360
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000

*

- 1.950
R-factor0.192
Rwork0.190
R-free0.22700
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.300

*

Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareCNS
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.980
High resolution limit [Å]1.9501.950
Rmerge0.0620.559
Total number of observations317025

*

Number of reflections29375
<I/σ(I)>22.83.5
Completeness [%]99.797.7
Redundancy10.86.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, sitting drop

*

5.618

*

12% PEG 6000, 0.1 M NA-CITRATE PH 5.6, 0.1 M LISO4
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein12 (mg/ml)
21reservoirPEG600012 (%(w/v))
31reservoirsodium citrate0.1 (M)pH5.6
41reservoir0.1 (M)

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon