1OIP
The Molecular Basis of Vitamin E Retention: Structure of Human Alpha-Tocopherol Transfer Protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-09-15 |
Detector | MARRESEARCH |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 77.810, 77.810, 128.360 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 * - 1.950 |
R-factor | 0.192 |
Rwork | 0.190 |
R-free | 0.22700 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.300 * |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | CNS |
Refinement software | REFMAC (5.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.980 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.062 | 0.559 |
Total number of observations | 317025 * | |
Number of reflections | 29375 | |
<I/σ(I)> | 22.8 | 3.5 |
Completeness [%] | 99.7 | 97.7 |
Redundancy | 10.8 | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, sitting drop * | 5.6 | 18 * | 12% PEG 6000, 0.1 M NA-CITRATE PH 5.6, 0.1 M LISO4 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 12 (mg/ml) | |
2 | 1 | reservoir | PEG6000 | 12 (%(w/v)) | |
3 | 1 | reservoir | sodium citrate | 0.1 (M) | pH5.6 |
4 | 1 | reservoir | 0.1 (M) |