1OBC
LEUCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH A POST-TRANSFER EDITING SUBSTRATE ANALOGUE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-2 |
Synchrotron site | ESRF |
Beamline | ID14-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-12-09 |
Detector | CCD |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 101.896, 154.810, 175.118 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.000 * - 2.100 |
R-factor | 0.193 |
Rwork | 0.193 |
R-free | 0.22500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1h3n |
RMSD bond length | 0.006 |
RMSD bond angle | 1.243 * |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 2.150 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.088 | 0.350 |
Number of reflections | 77419 | |
<I/σ(I)> | 6.3 | 2 |
Completeness [%] | 96.2 | 84.2 |
Redundancy | 2.3 | 1.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 6.5 | used microseeding, Yaremchuk, A., (2000) Acta Crystallogr., 56, 667. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | drop | Bis-Tris propane | 50 (mM) | pH6.0-6.5 |
3 | 1 | drop | dithiothreitol | 2 (mM) | |
4 | 1 | drop | 20 (mM) | ||
5 | 1 | drop | 1 (mM) | ||
6 | 1 | drop | ammonium sulfate | 15 (%sat) | |
7 | 1 | reservoir | ammonium sulfate | 30 (%) |